Welcome to CHAINOP’s documentation!

Contents: documentation of operational chains developped in PREVIMER project (ALYOTECH).

Allow to prepare forcings, launch MARS jobs and hindcasts.

Warning

You must be member of project https://forge.ifremer.fr/projects/previmerchainop/ to have authorisation to download and access to detailed documentation ! Ask authorisation to Lucia.Pineau.Guillou@ifremer.fr

Table of contents

• Installation and compilation
• MARS compilation (only for modified subroutines)
• Detailed documentation
• Configuration file (.cfg) and dependencies
• How does it work ?
• Forcing
  • Section meteo
    • Meteo forcing example
    • Meteo forcing configuration
  • Section river
    • River forcing example
    • River flow configuration
    • River nutriments configuration
  • Section wave
    • Wave forcing example
    • Wave forcing configuration
  • Section obc
    • OBC example
    • OBC configuration
• Run MARS
  • Initialization (section init)
  • MARS run (section rank_0 rank_1)
  • MARS hindcast (option –step)
  • MARS hindcast (new option –replay, from far better than –step!)
  • MARS run from Previmer restart files (option –run_from_backup)
  • How to use CHAINOP with your own MARS RDIR ?
• Post processing
  • Section format_oco
  • Section demerliac
  • Section mirror_copy
  • Section finalize
  • Extract data from Previmer database (Section previmer)
• Automatic cleaning of files (section clean)
• Create new configuration
• Install operational library in your own directory (only for developers)
• FAQ
  • Error: the configuration file is not valid
  • KO:Job was interrupted, caught SIGTERM (15) signal
  • KO:Treatment failed (list objects are unhashable)

Indices and tables

• Index

• Module Index

• Search Page